Englander Institute for Precision Medicine

Clinical, regional, and genetic characteristics of Covid-19 patients from UK Biobank.

TitleClinical, regional, and genetic characteristics of Covid-19 patients from UK Biobank.
Publication TypeJournal Article
Year of Publication2020
AuthorsKolin DA, Kulm S, Christos PJ, Elemento O
JournalPLoS One
Volume15
Issue11
Paginatione0241264
Date Published2020
ISSN1932-6203
KeywordsABO Blood-Group System, Adult, Aged, Betacoronavirus, Biological Specimen Banks, Black People, Comorbidity, Coronavirus Infections, COVID-19, Depression, Female, Humans, Longitudinal Studies, Male, Middle Aged, Myocardial Ischemia, Pandemics, Pneumonia, Viral, Prospective Studies, Pulmonary Disease, Chronic Obstructive, Risk Factors, SARS-CoV-2, United Kingdom
Abstract

BACKGROUND: Coronavirus disease 2019 (Covid-19) has rapidly infected millions of people worldwide. Recent studies suggest that racial minorities and patients with comorbidities are at higher risk of Covid-19. In this study, we analyzed the effects of clinical, regional, and genetic factors on Covid-19 positive status.

METHODS: The UK Biobank is a longitudinal cohort study that recruited participants from 2006 to 2010 from throughout the United Kingdom. Covid-19 test results were provided to UK Biobank starting on March 16, 2020. The main outcome measure in this study was Covid-19 positive status, determined by the presence of any positive test for a single individual. Clinical risk factors were derived from UK Biobank at baseline, and regional risk factors were imputed using census features local to each participant's home zone. We used robust adjusted Poisson regression with clustering by testing laboratory to estimate relative risk. Blood types were derived using genetic variants rs8176719 and rs8176746, and genomewide tests of association were conducted using logistic-Firth hybrid regression.

RESULTS: This prospective cohort study included 397,064 UK Biobank participants, of whom 968 tested positive for Covid-19. The unadjusted relative risk of Covid-19 for Black participants was 3.66 (95% CI 2.83-4.74), compared to White participants. Adjusting for Townsend deprivation index alone reduced the relative risk to 2.44 (95% CI 1.86-3.20). Comorbidities that significantly increased Covid-19 risk included chronic obstructive pulmonary disease (adjusted relative risk [ARR] 1.64, 95% CI 1.18-2.27), ischemic heart disease (ARR 1.48, 95% CI 1.16-1.89), and depression (ARR 1.32, 95% CI 1.03-1.70). There was some evidence that angiotensin converting enzyme inhibitors (ARR 1.48, 95% CI 1.13-1.93) were associated with increased risk of Covid-19. Each standard deviation increase in the number of total individuals living in a participant's locality was associated with increased risk of Covid-19 (ARR 1.14, 95% CI 1.08-1.20). Analyses of genetically inferred blood types confirmed that participants with type A blood had increased odds of Covid-19 compared to participants with type O blood (odds ratio [OR] 1.16, 95% CI 1.01-1.33). A meta-analysis of genomewide association studies across ancestry groups did not reveal any significant loci. Study limitations include confounding by indication, bias due to limited information on early Covid-19 test results, and inability to accurately gauge disease severity.

CONCLUSIONS: When assessing the association of Black race with Covid-19, adjusting for deprivation reduced the relative risk of Covid-19 by 33%. In the context of sociological research, these findings suggest that discrimination in the labor market may play a role in the high relative risk of Covid-19 for Black individuals. In this study, we also confirmed the association of blood type A with Covid-19, among other clinical and regional factors.

DOI10.1371/journal.pone.0241264
Alternate JournalPLoS One
PubMed ID33201886
PubMed Central IDPMC7671499
Grant ListMC_QA137853 / MRC_ / Medical Research Council / United Kingdom
U24 CA210989 / CA / NCI NIH HHS / United States
UL1 TR002384 / TR / NCATS NIH HHS / United States
P50 CA211024 / CA / NCI NIH HHS / United States
MC_PC_17228 / MRC_ / Medical Research Council / United Kingdom
R01 CA194547 / CA / NCI NIH HHS / United States

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