Title | Exome Sequencing of African-American Prostate Cancer Reveals Loss-of-Function Mutations. |
Publication Type | Journal Article |
Year of Publication | 2017 |
Authors | Huang FW, Mosquera JMiguel, Garofalo A, Oh C, Baco M, Amin-Mansour A, Rabasha B, Bahl S, Mullane SA, Robinson BD, Aldubayan S, Khani F, Karir B, Kim E, Chimene-Weiss J, Hofree M, Romanel A, Osborne JR, Kim JWook, Azabdaftari G, Woloszynska-Read A, Sfanos K, De Marzo AM, Demichelis F, Gabriel S, Van Allen EM, Mesirov J, Tamayo P, Rubin MA, Powell IJ, Garraway LA |
Journal | Cancer Discov |
Volume | 7 |
Issue | 9 |
Pagination | 973-983 |
Date Published | 2017 Sep |
ISSN | 2159-8290 |
Keywords | Animals, Black or African American, Cell Line, Tumor, Class I Phosphatidylinositol 3-Kinases, Exome, Exome Sequencing, Humans, Male, Mice, Mutation, Prostatic Neoplasms, PTEN Phosphohydrolase, Repressor Proteins |
Abstract | African-American men have the highest incidence of and mortality from prostate cancer. Whether a biological basis exists for this disparity remains unclear. Exome sequencing ( = 102) and targeted validation ( = 90) of localized primary hormone-naïve prostate cancer in African-American men identified several gene mutations not previously observed in this context, including recurrent loss-of-function mutations in , an ETS transcriptional repressor, in 5% of cases. Analysis of existing prostate cancer cohorts revealed deletions in 3% of primary prostate cancers and mutations or deletions in in 3% to 5% of lethal castration-resistant prostate cancers. Knockdown of confers increased anchorage-independent growth and generates a gene expression signature associated with oncogenic ETS activation and androgen signaling. Together, these results suggest that is a prostate cancer tumor-suppressor gene. More generally, our findings support the application of systematic cancer genomic characterization in settings of broader ancestral diversity to enhance discovery and, eventually, therapeutic applications. Systematic genomic sequencing of prostate cancer in African-American men revealed new insights into prostate cancer, including the identification of as a prostate cancer gene; somatic copy-number alteration differences; and uncommon and alterations. This study highlights the importance of inclusion of underrepresented minorities in cancer sequencing studies. . |
DOI | 10.1158/2159-8290.CD-16-0960 |
Alternate Journal | Cancer Discov |
PubMed ID | 28515055 |
PubMed Central ID | PMC5836784 |
Grant List | U54 CA137788 / CA / NCI NIH HHS / United States U24 CA194107 / CA / NCI NIH HHS / United States U01 CA162148 / CA / NCI NIH HHS / United States U54 CA132378 / CA / NCI NIH HHS / United States U01 CA176058 / CA / NCI NIH HHS / United States R01 CA109467 / CA / NCI NIH HHS / United States R01 CA121941 / CA / NCI NIH HHS / United States U01 CA111275 / CA / NCI NIH HHS / United States U54 HG003067 / HG / NHGRI NIH HHS / United States P30 CA016056 / CA / NCI NIH HHS / United States R01 CA116337 / CA / NCI NIH HHS / United States R01 CA154480 / CA / NCI NIH HHS / United States |