Englander Institute for Precision Medicine

Whole genome profiling of primary and metastatic adrenocortical carcinoma unravels significant molecular events.

TitleWhole genome profiling of primary and metastatic adrenocortical carcinoma unravels significant molecular events.
Publication TypeJournal Article
Year of Publication2024
AuthorsKalomeris T, Assaad MAl, de la Mora JDelgado-, Gundem G, Levine MF, Boyraz B, Manohar J, Sigouros M, Medina-Martínez JS, Sboner A, Elemento O, Scognamiglio T, Mosquera JMiguel
JournalPathol Res Pract
Volume266
Pagination155725
Date Published2024 Nov 29
ISSN1618-0631
Abstract

Adrenocortical carcinoma (ACC) is a rare, aggressive malignancy with limited treatment options and poor prognosis, with a 5-year survival rate of about 15 %. This study used whole genome sequencing to characterize the genomic landscape of five patients, one of them with both primary and metastatic samples. Key driver mutations were detected, including APC, JAK1, RFWD3 as well as other genes. Notably, a primary tumor harbored a RAD51 biallelic deleterious translocation, associated with homologous recombination deficiency signature. Large-scale copy neutral loss of heterozygosity (LOH) was identified in four tumors, three had TP53 mutations, with structural variants impacting genes as RB1, CDKN2A, and NF1. A genomic signature specific to mismatch repair was observed in a sample with MHS6 mutation. Two tumors presented novel fusions at TERT locus, including TERT::ZNF521. Comparative analysis between conventional and oncocytic ACC subtypes revealed no significant differences in mutation load, microsatellite instability, or specific gene enrichment. This comprehensive WGS analysis broadens the spectrum of genomic alterations in ACC, highlighting potential molecular targets and differences across subtypes that may inform future therapeutic strategies.

DOI10.1016/j.prp.2024.155725
Alternate JournalPathol Res Pract
PubMed ID39626581

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