Englander Institute for Precision Medicine

Publications

Found 790 results
Author Title Type [ Year(Asc)]
2020
Arnold M, Nho K, Kueider-Paisley A, Massaro T, Huynh K, Brauner B, MahmoudianDehkordi S, Louie G, M Moseley A, J Thompson W et al..  2020.  Sex and APOE ε4 genotype modify the Alzheimer's disease serum metabolome.. Nat Commun. 11(1):1148.
Butler DJ, Mozsary C, Meydan C, Danko D, Foox J, Rosiene J, Shaiber A, Afshinnekoo E, MacKay M, Sedlazeck FJ et al..  2020.  Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.. bioRxiv.
De Micheli AJ, Laurilliard EJ, Heinke CL, Ravichandran H, Fraczek P, Soueid-Baumgarten S, De Vlaminck I, Elemento O, Cosgrove BD.  2020.  Single-Cell Analysis of the Muscle Stem Cell Hierarchy Identifies Heterotypic Communication Signals Involved in Skeletal Muscle Regeneration.. Cell Rep. 30(10):3583-3595.e5.
Lehmann GL, Hanke-Gogokhia C, Hu Y, Bareja R, Salfati Z, Ginsberg M, Nolan DJ, Mendez-Huergo SP, Dalotto-Moreno T, Wojcinski A et al..  2020.  Single-cell profiling reveals an endothelium-mediated immunomodulatory pathway in the eye choroid.. J Exp Med. 217(6)
Auguste A, Blanc-Durand F, Deloger M, Le Formal A, Bareja R, Wilkes DC, Richon C, Brunn B, Caron O, Devouassoux-Shisheboran M et al..  2020.  Small Cell Carcinoma of the Ovary, Hypercalcemic Type (SCCOHT) beyond Mutations: A Comprehensive Genomic Analysis.. Cells. 9(6)
Benedetti E, Pučić-Baković M, Keser T, Gerstner N, Buyukozkan M, Štambuk T, Selman MHJ, Rudan I, Polašek O, Hayward C et al..  2020.  A strategy to incorporate prior knowledge into correlation network cutoff selection.. Nat Commun. 11(1):5153.
Haider S, Tyekucheva S, Prandi D, Fox NS, Ahn J, Xu AWei, Pantazi A, Park PJ, Laird PW, Sander C et al..  2020.  Systematic Assessment of Tumor Purity and Its Clinical Implications.. JCO Precis Oncol. 4
Benedetti E, Gerstner N, Pučić-Baković M, Keser T, Reiding KR, L Ruhaak R, Štambuk T, Selman MHJ, Rudan I, Polašek O et al..  2020.  Systematic Evaluation of Normalization Methods for Glycomics Data Based on Performance of Network Inference.. Metabolites. 10(7)
Galluzzi L.  2020.  Targeting Mutant KRAS for Immunogenic Cell Death Induction.. Trends Pharmacol Sci. 41(1):1-3.
Venturutti L, Teater M, Zhai A, Chadburn A, Babiker L, Kim D, Béguelin W, Lee TC, Kim Y, Chin CR et al..  2020.  TBL1XR1 Mutations Drive Extranodal Lymphoma by Inducing a Pro-tumorigenic Memory Fate.. Cell. 182(2):297-316.e27.
Medina-Martinez O, Haller M, Rosenfeld JA, O'Neill MA, Lamb DJ, Jamrich M.  2020.  The transcription factor is essential for normal eye development.. Dis Model Mech. 13(8)
Galluzzi L, Kroemer G.  2020.  Transient Autophagy Inhibition Precipitates Oncogenesis: A Red Flag For Pharmacological Autophagy Inhibitors? Trends Cell Biol. 30(5):339-340.
Vanmeerbeek I, Sprooten J, De Ruysscher D, Tejpar S, Vandenberghe P, Fucikova J, Spisek R, Zitvogel L, Kroemer G, Galluzzi L et al..  2020.  Trial watch: chemotherapy-induced immunogenic cell death in immuno-oncology.. Oncoimmunology. 9(1):1703449.
Frega G, Wu Q, Le Naour J, Vacchelli E, Galluzzi L, Kroemer G, Kepp O.  2020.  Trial Watch: experimental TLR7/TLR8 agonists for oncological indications.. Oncoimmunology. 9(1):1796002.
Le Naour J, Galluzzi L, Zitvogel L, Kroemer G, Vacchelli E.  2020.  Trial watch: IDO inhibitors in cancer therapy.. Oncoimmunology. 9(1):1777625.
Le Naour J, Zitvogel L, Galluzzi L, Vacchelli E, Kroemer G.  2020.  Trial watch: STING agonists in cancer therapy.. Oncoimmunology. 9(1):1777624.
Le Naour J, Galluzzi L, Zitvogel L, Kroemer G, Vacchelli E.  2020.  Trial watch: TLR3 agonists in cancer therapy.. Oncoimmunology. 9(1):1771143.
Pine AR, Cirigliano SM, Nicholson JG, Hu Y, Linkous A, Miyaguchi K, Edwards L, Singhania R, Schwartz TH, Ramakrishna R et al..  2020.  Tumor Microenvironment Is Critical for the Maintenance of Cellular States Found in Primary Glioblastomas.. Cancer Discov. 10(7):964-979.
Nienhold R, Ciani Y, Koelzer VH, Tzankov A, Haslbauer JD, Menter T, Schwab N, Henkel M, Frank A, Zsikla V et al..  2020.  Two distinct immunopathological profiles in autopsy lungs of COVID-19.. Nat Commun. 11(1):5086.
Chu C-S, Hellmuth JC, Singh R, Ying H-Y, Skrabanek L, Teater MR, Doane AS, Elemento O, Melnick AM, Roeder RG.  2020.  Unique Immune Cell Coactivators Specify Locus Control Region Function and Cell Stage.. Mol Cell. 80(5):845-861.e10.
Dooley BJ, Verma A, Ding R, Yang H, Muthukumar T, Lubetzky M, Shankaranarayanan D, Elemento O, Suthanthiran M.  2020.  Urinary Cell Transcriptome Profiling and Identification of ITM2A, SLAMF6, and IKZF3 as Biomarkers of Acute Rejection in Human Kidney Allografts.. Transplant Direct. 6(8):e588.
Verma A, Muthukumar T, Yang H, Lubetzky M, Cassidy MF, Lee JR, Dadhania DM, Snopkowski C, Shankaranarayanan D, Salvatore SP et al..  2020.  Urinary cell transcriptomics and acute rejection in human kidney allografts.. JCI Insight. 5(4)
Karaoğlanoğlu F, Ricketts C, Ebren E, Rasekh MEslami, Hajirasouliha I, Alkan C.  2020.  VALOR2: characterization of large-scale structural variants using linked-reads.. Genome Biol. 21(1):72.
Faquih T, van Smeden M, Luo J, le Cessie S, Kastenmüller G, Krumsiek J, Noordam R, van Heemst D, Rosendaal FR, Vlieg Avan Hylcka et al..  2020.  A Workflow for Missing Values Imputation of Untargeted Metabolomics Data.. Metabolites. 10(12)
2019
De Giorgi U, Procopio G, Giannarelli D, Sabbatini R, Bearz A, Buti S, Basso U, Mitterer M, Ortega C, Bidoli P et al..  2019.  Association of Systemic Inflammation Index and Body Mass Index with Survival in Patients with Renal Cell Cancer Treated with Nivolumab.. Clin Cancer Res. 25(13):3839-3846.